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  5. Sevir.3G006600.1

Sevir.3G006600.1


Description : tubby like protein 10


Gene families : OG_01_0012316 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012316_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G006600.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G006600.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_159
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_100


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000007 Tubby_C PRINTS 416 438
IPR000007 Tubby_C PRINTS 234 261
IPR000007 Tubby_C PRINTS 336 353
IPR000007 Tubby_C PRINTS 354 370
IPR000007 Tubby_C PRINTS 183 207
IPR000007 Tubby_C PRINTS 167 183
IPR000007 Tubby_C PRINTS 395 414
IPR018066 Tubby_C_CS ProSitePatterns 354 367
IPR036047 F-box-like_dom_sf SUPERFAMILY 43 95
IPR000007 Tubby_C Pfam 112 433
IPR018066 Tubby_C_CS ProSitePatterns 423 438
IPR001810 F-box_dom Pfam 51 98
IPR025659 Tubby-like_C Gene3D 110 432
IPR025659 Tubby-like_C SUPERFAMILY 100 438

No CAZYmes available for this sequence

No external refs found!