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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0010021 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010021_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi2g60290.2 | |
| Cluster | Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_128 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 645 | 675 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 254 | 407 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 79 | 253 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 718 | 921 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 648 | 674 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 341 | 369 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 136 | 160 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 442 | 476 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 782 | 815 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 719 | 739 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 545 | 572 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 442 | 472 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 341 | 369 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 747 | 775 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 136 | 160 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 648 | 674 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 313 | 339 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 782 | 809 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 408 | 494 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 744 | 778 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 339 | 369 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 440 | 475 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 497 | 596 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 597 | 704 |
No CAZYmes available for this sequence
| No external refs found! |