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  5. Bradi3g00350.3

Bradi3g00350.3


Description : HEAT repeat ;HECT-domain (ubiquitin-transferase)


Gene families : OG_01_0002166 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002166_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi3g00350.3
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_65


Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006511 ubiquitin-dependent protein catabolic process ISM GOs from InterProScan
MF GO:0061630 ubiquitin protein ligase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000569 HECT_dom Pfam 1505 1851
IPR000569 HECT_dom ProSiteProfiles 1459 1851
IPR000225 Armadillo SMART 176 222
IPR000225 Armadillo SMART 224 265
IPR000225 Armadillo SMART 307 345
IPR035983 Hect_E3_ubiquitin_ligase SUPERFAMILY 1412 1844
IPR011989 ARM-like Gene3D 132 433
IPR045322 HECTD1/TRIP12-like PANTHER 30 1851
IPR016024 ARM-type_fold SUPERFAMILY 144 614
IPR000569 HECT_dom CDD 1419 1846
IPR000569 HECT_dom SMART 1433 1851

No CAZYmes available for this sequence

No external refs found!