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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0008924 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008924_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi3g01116.2 | |
| Cluster | Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_106 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 283 | 634 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 228 | 415 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 282 | 316 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 536 | 570 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 385 | 457 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 310 | 384 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 238 | 309 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 588 | 750 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 501 | 535 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 317 | 351 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 462 | 585 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 504 | 533 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 183 | 209 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 470 | 499 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 429 | 456 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 212 | 246 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 80 | 230 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 352 | 387 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 425 | 459 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 317 | 365 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 246 | 292 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 215 | 247 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 470 | 499 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 180 | 211 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 285 | 317 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 319 | 350 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 539 | 571 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 250 | 283 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 177 | 211 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 247 | 281 |
No CAZYmes available for this sequence
| No external refs found! |