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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0020521 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0020521_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi3g03280.3 | |
| Cluster | Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_239 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 343 | 377 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 416 | 442 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 416 | 448 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 345 | 379 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 239 | 274 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 381 | 413 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 310 | 343 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 170 | 203 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 275 | 309 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 204 | 236 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 237 | 272 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 378 | 412 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 167 | 201 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 305 | 336 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 252 | 362 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 132 | 251 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 167 | 214 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 343 | 389 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 237 | 286 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 308 | 342 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 363 | 480 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 273 | 307 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 202 | 236 |
No CAZYmes available for this sequence
| No external refs found! |