Bradi3g05950.1

Description : elongation factor Ts family protein

Gene families : OG_01_0007515 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007515_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi3g05950.1
Cluster	Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_28

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003746	translation elongation factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006414	translational elongation	ISM	GOs from InterProScan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR012340	NA-bd_OB-fold	SUPERFAMILY	238	319
IPR003029	S1_domain	ProSiteProfiles	131	200
IPR009060	UBA-like_sf	SUPERFAMILY	767	818
IPR014039	Transl_elong_EFTs/EF1B_dimer	Pfam	578	720
IPR014039	Transl_elong_EFTs/EF1B_dimer	Pfam	818	961
IPR001816	Transl_elong_EFTs/EF1B	Hamap	524	737
IPR001816	Transl_elong_EFTs/EF1B	PANTHER	765	961
IPR001816	Transl_elong_EFTs/EF1B	PANTHER	277	741
IPR001816	Transl_elong_EFTs/EF1B	PANTHER	106	263
IPR018101	Transl_elong_Ts_CS	ProSitePatterns	598	608
IPR001816	Transl_elong_EFTs/EF1B	Hamap	766	962
IPR009060	UBA-like_sf	SUPERFAMILY	526	577
IPR003029	S1_domain	ProSiteProfiles	245	313
IPR018101	Transl_elong_Ts_CS	ProSitePatterns	775	790
IPR036402	EF-Ts_dimer_sf	SUPERFAMILY	820	961
IPR018101	Transl_elong_Ts_CS	ProSitePatterns	839	849
IPR001816	Transl_elong_EFTs/EF1B	TIGRFAM	615	737
IPR001816	Transl_elong_EFTs/EF1B	TIGRFAM	525	619
IPR001816	Transl_elong_EFTs/EF1B	TIGRFAM	766	866
IPR036402	EF-Ts_dimer_sf	Gene3D	582	719
IPR036402	EF-Ts_dimer_sf	Gene3D	823	960
IPR012340	NA-bd_OB-fold	SUPERFAMILY	125	200
IPR036402	EF-Ts_dimer_sf	SUPERFAMILY	579	720
IPR018101	Transl_elong_Ts_CS	ProSitePatterns	534	549
IPR003029	S1_domain	Pfam	243	306
IPR003029	S1_domain	Pfam	131	200

No CAZYmes available for this sequence

External Links

No external refs found!