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Description : polyubiquitin 10
Gene families : OG_01_0000003 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000003_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G084250.1 | |
| Neighborhood | Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G084250.1 | |
| Cluster | Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_214 | |
| Cluster | Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_46 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR000626 | Ubiquitin-like_dom | Pfam | 155 | 226 |
| IPR000626 | Ubiquitin-like_dom | Pfam | 3 | 74 |
| IPR000626 | Ubiquitin-like_dom | Pfam | 307 | 378 |
| IPR000626 | Ubiquitin-like_dom | Pfam | 79 | 150 |
| IPR000626 | Ubiquitin-like_dom | Pfam | 383 | 454 |
| IPR000626 | Ubiquitin-like_dom | Pfam | 231 | 302 |
| IPR019954 | Ubiquitin_CS | ProSitePatterns | 179 | 204 |
| IPR029071 | Ubiquitin-like_domsf | SUPERFAMILY | 304 | 380 |
| IPR029071 | Ubiquitin-like_domsf | SUPERFAMILY | 380 | 456 |
| IPR029071 | Ubiquitin-like_domsf | SUPERFAMILY | 152 | 228 |
| IPR019954 | Ubiquitin_CS | ProSitePatterns | 27 | 52 |
| IPR000626 | Ubiquitin-like_dom | ProSiteProfiles | 381 | 456 |
| IPR000626 | Ubiquitin-like_dom | ProSiteProfiles | 305 | 380 |
| IPR019954 | Ubiquitin_CS | ProSitePatterns | 407 | 432 |
| IPR000626 | Ubiquitin-like_dom | ProSiteProfiles | 153 | 228 |
| IPR000626 | Ubiquitin-like_dom | ProSiteProfiles | 229 | 304 |
| IPR000626 | Ubiquitin-like_dom | ProSiteProfiles | 1 | 76 |
| IPR000626 | Ubiquitin-like_dom | ProSiteProfiles | 77 | 152 |
| IPR019956 | Ubiquitin_dom | PRINTS | 53 | 74 |
| IPR019956 | Ubiquitin_dom | PRINTS | 32 | 52 |
| IPR019956 | Ubiquitin_dom | PRINTS | 11 | 31 |
| IPR029071 | Ubiquitin-like_domsf | SUPERFAMILY | 228 | 304 |
| IPR019954 | Ubiquitin_CS | ProSitePatterns | 255 | 280 |
| IPR029071 | Ubiquitin-like_domsf | SUPERFAMILY | 76 | 152 |
| IPR019954 | Ubiquitin_CS | ProSitePatterns | 103 | 128 |
| IPR029071 | Ubiquitin-like_domsf | SUPERFAMILY | 1 | 76 |
| IPR000626 | Ubiquitin-like_dom | SMART | 229 | 300 |
| IPR000626 | Ubiquitin-like_dom | SMART | 305 | 376 |
| IPR000626 | Ubiquitin-like_dom | SMART | 1 | 72 |
| IPR000626 | Ubiquitin-like_dom | SMART | 381 | 452 |
| IPR000626 | Ubiquitin-like_dom | SMART | 77 | 148 |
| IPR000626 | Ubiquitin-like_dom | SMART | 153 | 224 |
| IPR019954 | Ubiquitin_CS | ProSitePatterns | 331 | 356 |
No CAZYmes available for this sequence
| No external refs found! |