Bradi3g07350.1

Description : Pentatricopeptide repeat (PPR) superfamily protein

Gene families : OG_01_0014404 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014404_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi3g07350.1
Cluster	Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_30

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011990	TPR-like_helical_dom_sf	Gene3D	274	442
IPR044578	BIR6-like	PANTHER	26	593
IPR002885	Pentatricopeptide_rpt	Pfam	407	434
IPR002885	Pentatricopeptide_rpt	Pfam	96	124
IPR002885	Pentatricopeptide_rpt	Pfam	479	508
IPR011990	TPR-like_helical_dom_sf	Gene3D	443	565
IPR002885	Pentatricopeptide_rpt	TIGRFAM	479	510
IPR002885	Pentatricopeptide_rpt	ProSiteProfiles	476	510

No CAZYmes available for this sequence

External Links

No external refs found!