Sevir.3G021500.2

Description : CCCH-type zinc finger family protein

Gene families : OG_01_0006616 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006616_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G021500.2
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G021500.2
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_92
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_52

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000571	Znf_CCCH	SMART	106	132
IPR000571	Znf_CCCH	SMART	24	52
IPR000571	Znf_CCCH	SMART	57	80
IPR000571	Znf_CCCH	Pfam	108	132
IPR036855	Znf_CCCH_sf	SUPERFAMILY	107	131
IPR041686	Znf-CCCH_3	Pfam	26	81
IPR000571	Znf_CCCH	ProSiteProfiles	24	53
IPR000571	Znf_CCCH	ProSiteProfiles	106	133
IPR000571	Znf_CCCH	ProSiteProfiles	55	81

No CAZYmes available for this sequence

External Links

No external refs found!