Bradi3g12240.7

Description : binding

Gene families : OG_01_0002502 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002502_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi3g12240.7
Cluster	Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_65

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016570	histone modification	ISM	GOs from InterProScan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR019734	TPR_repeat	Pfam	752	776
IPR019734	TPR_repeat	ProSiteProfiles	207	240
IPR019734	TPR_repeat	SMART	315	348
IPR019734	TPR_repeat	SMART	785	818
IPR019734	TPR_repeat	SMART	161	198
IPR019734	TPR_repeat	SMART	566	599
IPR019734	TPR_repeat	SMART	127	160
IPR019734	TPR_repeat	SMART	710	743
IPR019734	TPR_repeat	SMART	207	240
IPR019734	TPR_repeat	SMART	386	419
IPR019734	TPR_repeat	SMART	749	782
IPR019734	TPR_repeat	SMART	459	488
IPR019734	TPR_repeat	SMART	352	385
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	93	422
IPR011990	TPR-like_helical_dom_sf	Gene3D	698	952
IPR019734	TPR_repeat	Pfam	316	342
IPR019734	TPR_repeat	Pfam	392	419
IPR011990	TPR-like_helical_dom_sf	Gene3D	195	425
IPR011990	TPR-like_helical_dom_sf	Gene3D	18	194
IPR019734	TPR_repeat	ProSiteProfiles	386	419
IPR031101	Ctr9	PANTHER	699	1076
IPR031101	Ctr9	PANTHER	1	674
IPR019734	TPR_repeat	Pfam	210	239
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	524	826
IPR011990	TPR-like_helical_dom_sf	Gene3D	430	657
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	391	486
IPR019734	TPR_repeat	ProSiteProfiles	352	385

No CAZYmes available for this sequence

External Links

No external refs found!

Bradi3g12240.7

Expression Profile

Co-expression Networks

Functional Annotation