Bradi3g16360.2

Description : Zinc finger (CCCH-type) family protein

Gene families : OG_01_0005695 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005695_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi3g16360.2
Cluster	Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_172

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000571	Znf_CCCH	Pfam	242	267
IPR000571	Znf_CCCH	Pfam	103	128
IPR000571	Znf_CCCH	ProSiteProfiles	102	129
IPR036855	Znf_CCCH_sf	SUPERFAMILY	238	272
IPR036855	Znf_CCCH_sf	SUPERFAMILY	175	204
IPR041367	Znf-CCCH_4	Pfam	180	202
IPR000571	Znf_CCCH	ProSiteProfiles	176	204
IPR045877	ZFP36-like	PANTHER	28	360
IPR036855	Znf_CCCH_sf	SUPERFAMILY	100	133
IPR000571	Znf_CCCH	ProSiteProfiles	241	269
IPR000571	Znf_CCCH	SMART	241	268
IPR000571	Znf_CCCH	SMART	102	128
IPR000571	Znf_CCCH	SMART	176	203

No CAZYmes available for this sequence

External Links

No external refs found!