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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0005187 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005187_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi3g28890.3 | |
| Cluster | Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_128 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 448 | 568 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 569 | 674 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 342 | 376 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 377 | 411 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 660 | 691 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 625 | 658 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 203 | 230 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 274 | 305 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 309 | 343 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 520 | 552 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 485 | 518 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 415 | 448 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 240 | 272 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 379 | 406 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 590 | 623 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 344 | 377 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 555 | 589 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 553 | 587 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 341 | 390 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 483 | 531 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 552 | 601 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 623 | 670 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 272 | 306 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 483 | 517 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 370 | 442 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 300 | 369 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 229 | 299 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 408 | 439 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 268 | 298 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 658 | 692 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 309 | 339 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 181 | 198 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 137 | 164 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 204 | 229 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 696 | 725 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 307 | 341 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 623 | 657 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 412 | 446 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 74 | 228 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 675 | 783 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 588 | 622 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 518 | 552 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 693 | 727 |
No CAZYmes available for this sequence
| No external refs found! |