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  5. Sevir.3G043600.1

Sevir.3G043600.1


Description : GTP-binding protein Obg/CgtA


Gene families : OG_01_0001928 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001928_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G043600.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G043600.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_149


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding ISM GOs from InterProScan
MF GO:0003924 GTPase activity ISM GOs from InterProScan
MF GO:0005525 GTP binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045086 OBG_GTPase PANTHER 264 538
IPR045086 OBG_GTPase PANTHER 33 176
IPR027417 P-loop_NTPase SUPERFAMILY 352 522
IPR027417 P-loop_NTPase Gene3D 350 528
IPR036726 GTP1_OBG_dom_sf SUPERFAMILY 53 348
IPR006073 GTP-bd Pfam 352 479
IPR006169 GTP1_OBG_dom Pfam 285 348
IPR006169 GTP1_OBG_dom Pfam 54 218
IPR031167 G_OBG CDD 351 524
IPR006073 GTP-bd PRINTS 353 373
IPR006073 GTP-bd PRINTS 402 417
IPR006073 GTP-bd PRINTS 374 392
IPR006073 GTP-bd PRINTS 419 437
IPR031167 G_OBG ProSiteProfiles 351 524
IPR006169 GTP1_OBG_dom ProSiteProfiles 51 350
IPR014100 GTP-bd_Obg/CgtA PIRSF 50 224
IPR014100 GTP-bd_Obg/CgtA PIRSF 266 533
IPR036726 GTP1_OBG_dom_sf Gene3D 53 224
IPR036726 GTP1_OBG_dom_sf Gene3D 259 349

No CAZYmes available for this sequence

No external refs found!