Sevir.3G047200.1

Description : DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain

Gene families : OG_01_0003304 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003304_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G047200.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G047200.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_65
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_28

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001965	Znf_PHD	SMART	118	171
IPR003034	SAP_dom	SMART	12	46
IPR004181	Znf_MIZ	Pfam	365	413
IPR036361	SAP_dom_sf	SUPERFAMILY	4	53
IPR003034	SAP_dom	Pfam	15	43
IPR011011	Znf_FYVE_PHD	SUPERFAMILY	114	174
IPR003034	SAP_dom	ProSiteProfiles	12	46
IPR013083	Znf_RING/FYVE/PHD	Gene3D	107	176
IPR004181	Znf_MIZ	ProSiteProfiles	354	431
IPR013083	Znf_RING/FYVE/PHD	Gene3D	344	453
IPR019786	Zinc_finger_PHD-type_CS	ProSitePatterns	119	170
IPR036361	SAP_dom_sf	Gene3D	1	56

No CAZYmes available for this sequence

External Links

No external refs found!