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  5. Sevir.3G051900.3

Sevir.3G051900.3


Description : AMP-dependent synthetase and ligase family protein


Gene families : OG_01_0003608 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003608_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G051900.3
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G051900.3 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_72


Type GO Term Name Evidence Source
MF GO:0004467 long-chain fatty acid-CoA ligase activity ISM GOs from InterProScan
BP GO:0006631 fatty acid metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR020845 AMP-binding_CS ProSitePatterns 230 241
IPR000873 AMP-dep_Synth/Lig_com Pfam 54 527
IPR045311 LC-FACS_euk CDD 77 658
IPR042099 ANL_N_sf Gene3D 39 519

No CAZYmes available for this sequence

No external refs found!