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  5. Sevir.3G059500.1

Sevir.3G059500.1


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0003606 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003606_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G059500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G059500.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_40
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_100


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 102 440
IPR001680 WD40_rpt Pfam 355 398
IPR001680 WD40_rpt Pfam 239 272
IPR001680 WD40_rpt Pfam 285 317
IPR001680 WD40_rpt Pfam 406 436
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 344 456
IPR001680 WD40_rpt ProSiteProfiles 239 272
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 85 192
IPR001680 WD40_rpt SMART 136 172
IPR001680 WD40_rpt SMART 188 229
IPR001680 WD40_rpt SMART 278 317
IPR001680 WD40_rpt SMART 353 398
IPR001680 WD40_rpt SMART 89 127
IPR001680 WD40_rpt SMART 232 272
IPR001680 WD40_rpt SMART 401 440
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 193 341
IPR001680 WD40_rpt ProSiteProfiles 285 326

No CAZYmes available for this sequence

No external refs found!