Sevir.3G060600.1

Description : RNA-binding CRS1 / YhbY (CRM) domain protein

Gene families : OG_01_0012163 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012163_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G060600.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G060600.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_7
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_48

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001890	RNA-binding_CRM	Pfam	136	220
IPR040286	At3g25440-like	PANTHER	463	641
IPR040286	At3g25440-like	PANTHER	19	459
IPR035920	YhbY-like_sf	SUPERFAMILY	135	229
IPR035920	YhbY-like_sf	Gene3D	135	231
IPR001890	RNA-binding_CRM	ProSiteProfiles	134	231
IPR001890	RNA-binding_CRM	SMART	136	220

No CAZYmes available for this sequence

External Links

No external refs found!