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  5. Bradi3g49340.4

Bradi3g49340.4


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0012454 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012454_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi3g49340.4
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_128


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt TIGRFAM 399 433
IPR002885 Pentatricopeptide_rpt TIGRFAM 261 287
IPR002885 Pentatricopeptide_rpt TIGRFAM 437 461
IPR002885 Pentatricopeptide_rpt TIGRFAM 365 397
IPR002885 Pentatricopeptide_rpt Pfam 436 462
IPR011990 TPR-like_helical_dom_sf Gene3D 57 211
IPR011990 TPR-like_helical_dom_sf Gene3D 363 563
IPR011990 TPR-like_helical_dom_sf Gene3D 212 362
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 259 293
IPR032867 DYW_dom Pfam 535 659
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 362 396
IPR002885 Pentatricopeptide_rpt Pfam 258 308
IPR002885 Pentatricopeptide_rpt Pfam 361 408

No CAZYmes available for this sequence

No external refs found!