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  5. Sevir.3G065100.1

Sevir.3G065100.1


Description : XB3 ortholog 1 in Arabidopsis thaliana


Gene families : OG_01_0000649 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000649_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G065100.1 No neighbors in network
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G065100.1
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_115


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002110 Ankyrin_rpt ProSiteProfiles 46 78
IPR002110 Ankyrin_rpt Pfam 115 179
IPR002110 Ankyrin_rpt ProSiteProfiles 195 227
IPR002110 Ankyrin_rpt ProSiteProfiles 158 190
IPR002110 Ankyrin_rpt SMART 46 75
IPR002110 Ankyrin_rpt SMART 113 142
IPR002110 Ankyrin_rpt SMART 158 187
IPR002110 Ankyrin_rpt SMART 195 224
IPR002110 Ankyrin_rpt SMART 79 108
IPR002110 Ankyrin_rpt SMART 228 257
IPR002110 Ankyrin_rpt Pfam 196 221
IPR002110 Ankyrin_rpt ProSiteProfiles 79 111
IPR001841 Znf_RING ProSiteProfiles 324 373
IPR036770 Ankyrin_rpt-contain_sf Gene3D 194 256
IPR013083 Znf_RING/FYVE/PHD Gene3D 307 381
IPR036770 Ankyrin_rpt-contain_sf Gene3D 6 110
IPR036770 Ankyrin_rpt-contain_sf Gene3D 111 193
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 18 251
IPR002110 Ankyrin_rpt Pfam 18 110

No CAZYmes available for this sequence

No external refs found!