Bradi3g52951.1

Description : nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding

Gene families : OG_01_0006304 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006304_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi3g52951.1
Cluster	Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_202

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	ISM	GOs from InterProScan
BP	GO:0008213	protein alkylation	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
MF	GO:0018024	obsolete histone lysine N-methyltransferase activity	ISM	GOs from InterProScan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034968	histone lysine methylation	ISM	GOs from InterProScan
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013087	Znf_C2H2_type	ProSitePatterns	1092	1113
IPR001214	SET_dom	ProSiteProfiles	1475	1603
IPR007728	Pre-SET_dom	ProSiteProfiles	1396	1472
IPR013087	Znf_C2H2_type	ProSitePatterns	1025	1046
IPR013087	Znf_C2H2_type	ProSitePatterns	957	978
IPR013087	Znf_C2H2_type	ProSiteProfiles	989	1017
IPR007728	Pre-SET_dom	Pfam	1337	1467
IPR013087	Znf_C2H2_type	ProSiteProfiles	955	983
IPR003616	Post-SET_dom	ProSiteProfiles	1610	1626
IPR001214	SET_dom	Pfam	1486	1602
IPR013087	Znf_C2H2_type	ProSitePatterns	991	1012
IPR013087	Znf_C2H2_type	ProSiteProfiles	1090	1118
IPR001214	SET_dom	SMART	1475	1609
IPR013087	Znf_C2H2_type	SMART	1023	1046
IPR013087	Znf_C2H2_type	SMART	955	978
IPR013087	Znf_C2H2_type	SMART	1090	1113
IPR013087	Znf_C2H2_type	SMART	989	1012
IPR007728	Pre-SET_dom	SMART	1333	1459
IPR040689	SUVR5_Znf-C2H2_3rpt	Pfam	991	1114
IPR021721	Znf_CCCH-type_TRM13	Pfam	627	655

No CAZYmes available for this sequence

External Links

No external refs found!

Bradi3g52951.1

Expression Profile

Co-expression Networks

Functional Annotation